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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015797643.1_cds_XP_016456131.1_4947
CDS Infomation

[gene=LOC107780123] [db_xref=GeneID:107780123] [protein=sulfoquinovosyl transferase SQD2-like] [protein_id=XP_016456131.1] [location=join(17630..17970,19280..19346,19744..19814,19992..20109,20230..20303,20555..20610,20701..20784,20984..21071,21169..21246,21392..21448,22764..23259)] [gbkey=CDS]
Sequence

ATGTCCAACTATTCTCTCTTTATAAATTCTTCTTCATTTACACCCTTTAATTATTCCTTA
CCTCCCTCTTCCTCTAGTTTTCATAAAGTTTCTTGCTTTTCTACTTCAAGAACATACCCC
ATTAGTTTAATTTGCAAAAAGATCAACTTTTTACAGTGTAAAAAGAGTTTTAACAAAAGA
CCCTTCAAGAAAAGATCCTTAATTGCTGCAAAAGCTAGTAATAAGATGACAATTACTGAG
TACAGAGATGAAGAGGAAGAGAATCCTCCTCCTTTGCTTGTATCTGAAATGAGTTCAACG
CCTAGGCGTATTGCTCTCTTTGTTGAGCCTTCTCCTTTTGCGTATGTTTCTGGATATAAG
AACAGGTTCCAGAATTTTATAAAGTATCTCCGGGAAATGGGGGATGAGGTTATGGTTGTG
ACGACGCATGAAGGAGTACCCCAAGAATTTTATGGGGCAAAGTTGATAGGATCACAGAGT
TTTCCCTGCCCCTGGTACCGGAAAGTACCCCTCTCACTTGCTCTCAGCCCTAGAATAATC
TCAGAGGTAGTACAGTTCAAGCCTGATATCATACATGCATCATCTCCTGGTATAATGGTA
TTTGGTGCTCTTATCATTGCGAAACTTCTATCTGTGCCGATTGTAATGTCTTACCACACG
CATGTGCCAGTGTACATACCCAGATACACCTTTAGTTGGCTGGTTCAACCAATGTGGATG
ATTATAAAGTTTCTACATGGAGCTGCTGATCTTACACTGGTTCCATCTGCTGCTATCGCA
AAGGATCTGGAAGCTTATAAGGTAACAAAAGCTAACAGAATACGTTTGTGGAATAAGGGT
GTCGATTCCGAGAGCTTCCACCCCCGTTATCGGTCTCATGAAATGCGACTAAGACTAAGT
AATGGAGAATCCGATAAACCTTTGATAGTCCATGTTGGACGACTTGGAGTTGAGAAGAGT
TTGGATTTCCTCAAAAGGGTCATGGATAGACTTCCAGATGCTCGCATTGCTTTTATTGGA
GATGGGCCATACAGGGAGGAATTGGAGAAAATGTTCCATGGCATGCCTGCCGTGTTCACA
GGTATGTTACTAGGAGAGGAGCTTTCCCAAGCATATGCCAGCGGAGATGTTTTTCTTATG
CCTTCAGAGTCAGAGACACTGGGGCTCGTCGTTTTGGAGGCCATGTCATCAGGGCTTCCT
GTAGTAGCTGCCCGTGCCGGTGGAGTTCCAGATATCATCCCTGACGATCAGCAGGGCAAG
ATTGGGTATCTGTTTAATCCTGGGGACCTTGACGACTGCATGAGCAAACTAGTGCCTCTT
TTGCGCGACGCTGAATTGAGAGAAACTATGGGGAAAACTGCACGCATAGAGATGGAGAAA
TATGACTGGAAAGCTGCAACAAGAACGATTCGTAACGAACAGTACAGTGCAGCCATTTGG
TTCTGGAAGAAGCAGAGAACAGTATTCCTGAGACCATTTCAATGGATGTTTAGGTGTATA
TTCGCAGCTCCAGAAGTCTACTATAGGTGA

Peptide Sequence

PEP ID

XP_016456131.1
PEP Infomation

PREDICTED: sulfoquinovosyl transferase SQD2-like [Nicotiana tabacum]
Sequence

MSNYSLFINSSSFTPFNYSLPPSSSSFHKVSCFSTSRTYPISLICKKINFLQCKKSFNKR
PFKKRSLIAAKASNKMTITEYRDEEEENPPPLLVSEMSSTPRRIALFVEPSPFAYVSGYK
NRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSQSFPCPWYRKVPLSLALSPRII
SEVVQFKPDIIHASSPGIMVFGALIIAKLLSVPIVMSYHTHVPVYIPRYTFSWLVQPMWM
IIKFLHGAADLTLVPSAAIAKDLEAYKVTKANRIRLWNKGVDSESFHPRYRSHEMRLRLS
NGESDKPLIVHVGRLGVEKSLDFLKRVMDRLPDARIAFIGDGPYREELEKMFHGMPAVFT
GMLLGEELSQAYASGDVFLMPSESETLGLVVLEAMSSGLPVVAARAGGVPDIIPDDQQGK
IGYLFNPGDLDDCMSKLVPLLRDAELRETMGKTARIEMEKYDWKAATRTIRNEQYSAAIW
FWKKQRTVFLRPFQWMFRCIFAAPEVYYR

Transcript Sequence

Gene sequence data has not been registered.